Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820983.1_cds_XP_016500602.1_14414
CDS Infomation

[gene=LOC107819041] [db_xref=GeneID:107819041] [protein=probable protein phosphatase 2C 6] [protein_id=XP_016500602.1] [location=join(76841..77128,77758..78135,81825..81942,82046..82269,82431..82982)] [gbkey=CDS]
Sequence

ATGGGGATTTGCTATTCATCAAGTAAAAGCAAGAGCGGTGATGGGTTATGGGACAGTAAC
AGTGAAAGCGGAAGAGCTGATTCCAAGTTGAGAAAGAACAGCTACAGTGGCGATTTCAGC
ACATTTTTAAGCAAGTTAAGCGGCGGTATTGGTGGAGGAGGAGGTGAGGACCGGGCGCTG
CATCATATTCCTGGACGGCTTTTAGCAAATGGCGCAACCTCTGTTGCTTGCTTACATACT
CAACAAGGAAAAAAAGGAACCAATCAGGATGCGATGATCGTTTGGGAGAATTTTTGTTCG
AGAAGTGATACAACCTTTTGTGGAGTATTTGATGGACATGGTCCGTATGGCCATATGGTG
GCAAGGAAAGTTCGAGATACCCTTCCACTTCTCCTGCGTTCAGAGTGGGAGGTTAAGTCC
AGTGGCGATCAATGTAATGCTTCTGAGAATGGAAATGCTAATGGAGGTTCACATCTTGAT
GACGTCTTGGATGATGATTTGACTGAAGCTGTGGAAGCCGAGAGCAATGAAAAGTTCCCA
GAAATACATCTTCCCCTTAAGAGGTCACTATTAAAAGCTTTCAGATCAATGGATAAGGAA
CTCAAGCTGCATCCGTCAATTGACTGTTTCTGTAGTGGGTCAACTGCTGTTTCCTTGGTG
ATGCAGGGCCAGGATATAATAGTTGGCAATGTTGGTGACTCAAGAGCAGTATTGGCAACG
AGAGATAAAGAGAACTATTTGACGGCTGTACAGTTGACAGTTGATTTGAAGCCTAATCTT
CCAAGAGAAGCTGCTAGGATACAGAAATGCAAAGGCAGAGTTTTTGCGTTGCAAGATGAG
CCAGAGGTTGCACGTGTATGGTTGCCAAACAGTGATTCTCCTGGTTTGGCAATGGCCAGA
GCATTTGGTGATTTTTGTCTCAAGGATTTTGGTTTAATCTCTGTCCCTGATGTGTATTAC
CACCACATTACCGATAGGGATGAGTTTGTTGTTCTAGCAACCGATGGGGTATGGGATGTC
CTTTCTAATAAGGAAGCTGTGGATATTGCGGCCTCAGCCCCAAATCGCGCTACAGCTGCC
CGAGCTCTTGTTGACTGCGCGACAAGAGCTTGGAGACTGAAGTACCCAACATCAAAGAAT
GATGACTGTGCTGTAGTATGCCTTTTCCTGGACGGCGTACCTGCACCTAATGCCATAGTG
ACAGAGAAGCAATATGATTTGACAAAGGCTCCTGAAGTGGAAATGAAGACAATTATTACA
GATGGCAACTTTGAAAGTGCAGATGTCGATACTGTTTCAGTTTCTCATTTTGCTGTTCTT
GAACATTCAGGTACTACAAAAGATTCCAGTGAGATAGTTCCTGTTGATGAGTCAGTGGAA
GAACAGCTTGCTGATAAGGGTCTTGGCCAGTCTAAGAGAAGCCTAGCTGAGTGCCTTTCA
ACTGCACAAGATGAGGAATGGTCGGCCCTTGAGGGAGTTACAAGGGTTAATAGCCTTCTT
AGTCTTCCTAGATTCTTGTCTGGTGACAAAAGGTCAGCCAGTTGGAGAAAATGGTTGTAA

Peptide Sequence

PEP ID

XP_016500602.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 6 [Nicotiana tabacum]
Sequence

MGICYSSSKSKSGDGLWDSNSESGRADSKLRKNSYSGDFSTFLSKLSGGIGGGGGEDRAL
HHIPGRLLANGATSVACLHTQQGKKGTNQDAMIVWENFCSRSDTTFCGVFDGHGPYGHMV
ARKVRDTLPLLLRSEWEVKSSGDQCNASENGNANGGSHLDDVLDDDLTEAVEAESNEKFP
EIHLPLKRSLLKAFRSMDKELKLHPSIDCFCSGSTAVSLVMQGQDIIVGNVGDSRAVLAT
RDKENYLTAVQLTVDLKPNLPREAARIQKCKGRVFALQDEPEVARVWLPNSDSPGLAMAR
AFGDFCLKDFGLISVPDVYYHHITDRDEFVVLATDGVWDVLSNKEAVDIAASAPNRATAA
RALVDCATRAWRLKYPTSKNDDCAVVCLFLDGVPAPNAIVTEKQYDLTKAPEVEMKTIIT
DGNFESADVDTVSVSHFAVLEHSGTTKDSSEIVPVDESVEEQLADKGLGQSKRSLAECLS
TAQDEEWSALEGVTRVNSLLSLPRFLSGDKRSASWRKWL

Transcript Sequence

Gene sequence data has not been registered.